Insertion junction: CLIP2.070317_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070317
Chromosome:chromosome 3
Location:7869327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGATGCTACTTGTTAAGTGCATTCACACGCAATCATACTTATCATAC
Internal bar code:CCAACGTGGCGCCGTAAACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2112
LEAP-Seq percent confirming:70.2703
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTTGCTCGCCTTTCATG
Suggested primer 2:CGGTGTAAACGGCTACAGGT