Insertion junction: CLIP2.070320_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070320
Chromosome:chromosome 17
Location:3505901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCTGTTGTAAGGTTTGCAATGCCACGCACTGCACCGTGCCCGCGGTC
Internal bar code:TAGATTAATAAAGCCAGGTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2039
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTAGGAAGCTGCGTGTGT
Suggested primer 2:TGCATCATTCCCTGCCCATT