Insertion junction: CLIP2.070322_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070322
Chromosome:chromosome 6
Location:7556995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g301500 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGGGTCGAGTGGCTGGGCAGGGGCTAGCGCCGCAGAGGGCGGGCAGG
Internal bar code:GCTTAGGTTTTCATAGTGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1146
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCGTGTTTGTCCCACAC
Suggested primer 2:GACCTGCATCACCACCATCA