Insertion junction: CLIP2.070324_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070324
Chromosome:chromosome 9
Location:1449454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAATGTGAACTGTTACAAAGAATGGGCTGGGGTGCTCGGCAAGAGAG
Internal bar code:TAAAGGTACAGAAACGGTGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2183
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAAGCTGTCAACAAAGCC
Suggested primer 2:TCAGTTCGTTTGCCGCAAAG