Insertion junction: CLIP2.070324_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070324
Chromosome:chromosome 14
Location:3021136
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g627750 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAATCGGGATGGCGGGGCCAGCAGCTCAGCTGCATCGGCGCCGGGCAC
Internal bar code:GGGCATTTTATCTATCGCCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:28.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAACCCTCAGCGTCAAG
Suggested primer 2:CAATCGACAGCATGCGGATG