Insertion junction: CLIP2.070333_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070333
Chromosome:chromosome 1
Location:7610069
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800140 (1 of 1) K12800 - NACHT, LRR and PYD domains-containing protein 3 (NLRP3, PYPAF1) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGTAAGATGCTTAACAATGTTGGTGCATTGTTGGTGGGATGTTTCTA
Internal bar code:CTTCTGAGCTATTATAGATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1912
LEAP-Seq percent confirming:58.8889
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTAGCCCACGCACCTTAA
Suggested primer 2:ATGGGGTTTTGAGGAGCGAG