Insertion junction: CLIP2.070335_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070335
Chromosome:chromosome 3
Location:716422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145907 (1 of 1) 2.1.1.205 - tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGACAAATTCAACAGTCTTTCATACATGGATGTGCACCACGTCTTGCA
Internal bar code:CTTTGTAGAACTGGTTTTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:417
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCAGGTGATCCCAGA
Suggested primer 2:TGTGAACCAAGACATCGCCA