Insertion junction: CLIP2.070340_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070340
Chromosome:chromosome 3
Location:8236731
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199950 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAGAACATTCGTCAGATTGAGGTCTGGCGGTCATGTCGCATGCGGAG
Internal bar code:GGAATATGAGCTGAAGACAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2285
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTGCGAAAGAAACCGTA
Suggested primer 2:TGGCCTCCAAGTGTTCGTAC