Insertion junction: CLIP2.070350_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070350
Chromosome:chromosome 10
Location:2614316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436850 (1 of 7) 2.4.1.255 - Protein O-GlcNAc transferase / OGTase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTGCTTGGTGTGGGCACGCGGCAAATCCGCAAATGTGAGAGAGCCAC
Internal bar code:AGTTAGGGTAGCAGTTGGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:7018
LEAP-Seq percent confirming:94.6903
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:TAATGTGAACGCCCCAGTCC
Suggested primer 2:AAGAACCCCACATACGCAGG