Insertion junction: CLIP2.070352_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070352
Chromosome:chromosome 12
Location:9652179
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g558353 (1 of 11) PF00999 - Sodium/hydrogen exchanger family (Na_H_Exchanger) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTTGGGCAATGCCCCCTGGCCCTCCCCCACCTCCCAACCTCAAACAT
Internal bar code:CCGCATCAGGCCAAAGATCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:72
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTTCCAGCTGTCACGGAG
Suggested primer 2:CACCTCCATACCCATACGGC