Insertion junction: CLIP2.070353_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070353
Chromosome:chromosome 3
Location:8066748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201332 (1 of 11) 2.1.1.259 - [Fructose-bisphosphate aldolase]-lysine N-methyltransferase / (dimerizing)]-lysine 6-N-methyltransferase 5'UTR
Cre03.g201350 (1 of 100) IPR001810 - F-box domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAATCAACCTCGCGCGGTGTGCGCTTGGATGTAACATTTGGCGGCCA
Internal bar code:AATTTACCTTTACCCCCATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2774
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCGGCCACATTGTGACT
Suggested primer 2:AGACTTGTATGGCAGGTGGC