Insertion junction: CLIP2.070353_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070353
Chromosome:chromosome 3
Location:8066754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201332 (1 of 11) 2.1.1.259 - [Fructose-bisphosphate aldolase]-lysine N-methyltransferase / (dimerizing)]-lysine 6-N-methyltransferase 5'UTR
Cre03.g201350 (1 of 100) IPR001810 - F-box domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGAATGCAGCGCTGAATGCAGCGGTCCGAGCACGAGCTTATGGTTCT
Internal bar code:TAACTAAAGCAAACATCTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2993
LEAP-Seq percent confirming:38.4
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:125

Suggested primers for confirmation by PCR

Suggested primer 1:AGACTTGTATGGCAGGTGGC
Suggested primer 2:ATGTCGGCCACATTGTGACT