Insertion junction: CLIP2.070359_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070359
Chromosome:chromosome 2
Location:6494129
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388800 GDH1 Glutamate dehydrogenase; (1 of 2) 1.4.1.3 - Glutamate dehydrogenase (NAD(P)(+)) / Glutamic dehydrogenase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACAAGACCCGGCTCAGTCCGTCTCACCATGCATGCACAGGCACGTACC
Internal bar code:GTGCTTCTCGACAAGCTAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1000
LEAP-Seq percent confirming:55.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCTGAGGGTCGAAGTCC
Suggested primer 2:CTGTATGGCGCTACGGTGAT