Insertion junction: CLIP2.070369_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070369
Chromosome:chromosome 7
Location:163865
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g313206 (1 of 2) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGAGGGAGAGGACAGGAGAGGCCGACTTGCCACACGCGCCTGCTGC
Internal bar code:CACATACCTTTTGCCGTCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:206
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGGAGGGGGTTAAATGG
Suggested primer 2:CACCCTGGACAGTTCCTGAC