Insertion junction: CLIP2.070373_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070373
Chromosome:chromosome 17
Location:3488849
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g724000 (1 of 2) PF14908 - Domain of unknown function (DUF4496) (DUF4496) 3'UTR
Cre17.g724050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATTTATGAAGTTGTGCTTCAATCCTACACACGGGCAGCCCGTATTAC
Internal bar code:CGACCCAATGCTAATAGAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:594
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGGGGTACAACTGTGGG
Suggested primer 2:CCTTAAGTCACTGGGGCAGG