Insertion junction: CLIP2.070391_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070391
Chromosome:chromosome 8
Location:443512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358800 (1 of 2) 5.1.1.17 - Isopenicillin-N epimerase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCGACCGCGTCAGAACCTCCCCGCGCAGAGGCGACTGATGTTTAAGG
Internal bar code:TTCTATGCAAGTGTCAAGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1370
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCAGCACTCACGTCCTCA
Suggested primer 2:GGTGAGTTTGTTCCACACGC