Insertion junction: CLIP2.070398_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070398
Chromosome:chromosome 4
Location:3667665
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228850 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCAGTTGGCCCACGGCATCTCCGCGGCCACCCCGCAGCGGTCACGAA
Internal bar code:GGGCATCCTGTCTGCACAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1393
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGACCCAGTATTTGGTCC
Suggested primer 2:GCTGACACACACACACACAC