Insertion junction: CLIP2.070404_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070404
Chromosome:chromosome 8
Location:4370052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384864 (1 of 1) PF00018//PF14604 - SH3 domain (SH3_1) // Variant SH3 domain (SH3_9) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTATAGTTACTGTGGCTTGAGTCTCATATAGTTGACAAGTCCGATGG
Internal bar code:GAGGGCTGAAGACGCGAGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1325
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATGAGCCGCTCGATCTC
Suggested primer 2:ATGGGCATGGATGAGGTTGG