Insertion junction: CLIP2.070408_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070408
Chromosome:chromosome 17
Location:6609724
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745497 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAAGTTTCAATGCGCTATGGCCTGCGCGCGCTAAGTGTTGCGGACGGA
Internal bar code:GGTCACAAGCATGTGAAAGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:913
LEAP-Seq percent confirming:34.375
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGGGGCCATCAATGATT
Suggested primer 2:AGCATCTGTGTCGCACTTGA