Insertion junction: CLIP2.070412_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070412
Chromosome:chromosome 1
Location:5527556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039350 NCR2 Cytochrome P450 reductase, possibly CYP505 family; (1 of 2) 1.6.2.4 - NADPH--hemoprotein reductase / TPNH-cytochrome c reductase 5'UTR
Cre01.g039400 (1 of 1) 3.8.1.5 - Haloalkane dehalogenase / 1-chlorohexane halidohydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAATATGTTTGAACGGCGCTTCCGCTTCAGCGCGACTGAAGGTACCCGA
Internal bar code:GGCTTGCATTGATAGCACTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3463
LEAP-Seq percent confirming:98.75
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTGTCGACCTTGTCACA
Suggested primer 2:GTTTCTGTGCACGTCACCAC