Insertion junction: CLIP2.070417_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070417
Chromosome:chromosome 10
Location:1112075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425400 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCGTGGTGGGATACACTCGGTACAGTAACTTCGGCGTTCTGCTAAC
Internal bar code:ATTGACGTTCAGGTGCAGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1966
LEAP-Seq percent confirming:28.9474
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGCAGCGTTGAAGAGG
Suggested primer 2:AGGTTGTGAAGAGCAGGAGC