Insertion junction: CLIP2.070420_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070420
Chromosome:chromosome 7
Location:629463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316900 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCATCGCCAATTCTGCAACAGCAGATGCCTGGGCTGTACCACGGGCGC
Internal bar code:GGAACGGCGTGTCGGATACGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1418
LEAP-Seq percent confirming:35.0877
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTATGTCTGGGGTGGGC
Suggested primer 2:CGCAGCATCCTTACCAATGC