Insertion junction: CLIP2.070420_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070420
Chromosome:chromosome 7
Location:629464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316900 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTGTATGAGTCATTGGCTAGGCGCTGCACAGGCACCGGTTGGCCCCG
Internal bar code:CCGAGTGCGTCTTGTGCCACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1721
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGCATCCTTACCAATGC
Suggested primer 2:TTTGTATGTCTGGGGTGGGC