Insertion junction: CLIP2.070421_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070421
Chromosome:chromosome 3
Location:2341765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158150 (1 of 1) K12842 - U2-associated protein SR140 (SR140) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCCGCTGTCTGCACCTGCCTCATACGGAAGTCACGCTCCGCAGACCT
Internal bar code:GCAAATTGGTGTTGCCGAACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4200
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGCCTAGATGTTCGTCC
Suggested primer 2:TGGCCCTGGTATGAAGCTTG