Insertion junction: CLIP2.070421_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070421
Chromosome:chromosome 3
Location:2341766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158150 (1 of 1) K12842 - U2-associated protein SR140 (SR140) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGTGCAGGAGGCAGGGGCGTGAACTGGCACTGGTCGCCTGCTCACGG
Internal bar code:GATATGTCCTTCTGCGGCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3298
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCCTGGTATGAAGCTTG
Suggested primer 2:CGAGGCCTAGATGTTCGTCC