Insertion junction: CLIP2.070425_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070425
Chromosome:chromosome 13
Location:3785171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588950 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGATATTTCGGCGGGGCCCATTGCGATACGCGACTAGTCAGCAACGT
Internal bar code:CGGATAGGACGGCTGGACTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1372
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCGGTTACGTTACGAC
Suggested primer 2:CTGCAACCACACGAATGCAA