Insertion junction: CLIP2.070428_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070428
Chromosome:chromosome 6
Location:1402487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259650 MPA7 Metallophosphoesterase/metallo-dependent phosphatase; (1 of 1) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 3'UTR
Cre06.g259700 (1 of 6) 3.1.2.2 - Palmitoyl-CoA hydrolase / Long-chain fatty-acyl-CoA hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGTAGGCGCTACGTAAGGCACGTATCCTAGGCCTCGTGCCCACGCGC
Internal bar code:CTCATTGCGAGTTGGGTACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1087
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:TATCGGCTGAGTCGTGATGC
Suggested primer 2:ACCTTGTCAGGCTTCACGAG