Insertion junction: CLIP2.070439_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070439
Chromosome:chromosome 12
Location:6766107
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g801452 (1 of 73) IPR000477//IPR005135 - Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTCACCCTGTCCTTGCCCGACCTGCCACATGCGCACCGGGAGCAGT
Internal bar code:GCGTTCCACGGCTTTCGTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATCAGGCCTTGGAGGTA
Suggested primer 2:CAAACGCCACATCAGCAACA