Insertion junction: CLIP2.070446_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070446
Chromosome:chromosome 14
Location:3629457
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g801660 (1 of 1) PF00059//PF01476 - Lectin C-type domain (Lectin_C) // LysM domain (LysM) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAGCGGAACCCCTGCCCACGTGCTACCCAAGCTTGTCAGCTCTCGCG
Internal bar code:AGATAATTTTAGGGGCCACGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:877
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CATTAGCTGCGTTGGGATGC
Suggested primer 2:TGGTTACACGCAACCCTACC