Insertion junction: CLIP2.070448_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070448
Chromosome:chromosome 3
Location:2204467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157300 CAF1 (1 of 1) K12581 - CCR4-NOT transcription complex subunit 7/8 (CNOT7_8, CAF1, POP2); CCR4-associated factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAGGTTTGTTGAAGGCAAGCGGGAACGGATTGGAACTCCAAGGAGGG
Internal bar code:GTCACAGTCACGCTCACCCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3614
LEAP-Seq percent confirming:72.4138
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTCTCGGACAGGAGACT
Suggested primer 2:GTGAGGGAGCGATCAGGATG