Insertion junction: CLIP2.070448_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070448
Chromosome:chromosome 3
Location:2204484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157300 CAF1 (1 of 1) K12581 - CCR4-NOT transcription complex subunit 7/8 (CNOT7_8, CAF1, POP2); CCR4-associated factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCACTGTCGTGACACCAAAACCACGTGAATCAAATGTCTCCTTCCAT
Internal bar code:GTCACAGTCACGCTCACCCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1808
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGGGAGCGATCAGGATG
Suggested primer 2:AGCTTCTCGGACAGGAGACT