Insertion junction: CLIP2.070450_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070450
Chromosome:contig 26
Location:13453
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g734757 TET5 (1 of 12) PF12851 - Oxygenase domain of the 2OGFeDO superfamily (Tet_JBP); {"non-canonical TET-dioxygenase, putative 5-methylcytosine-modifying enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGATGCAGAAGTTCTTGTTGCGCAGCGCTTGCCTGTATATACACAAT
Internal bar code:CCGGCATTCAGGTAGCTTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:173
LEAP-Seq percent confirming:3.125
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAAGCTTCGCAAGGTGTA
Suggested primer 2:CAAACATGTGCACAGCGTCA