Insertion junction: CLIP2.070453_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070453
Chromosome:chromosome 5
Location:3340941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232600 (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATTTGCTTCGCCCGATTTCTTCCTGTTCATCCCGCTGCCCCCGACCC
Internal bar code:GCCACCTATAAGTCTTGGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:687
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACCT
Suggested primer 2:CAGATGTGCCTCCTGCTGAA