Insertion junction: CLIP2.070455_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070455
Chromosome:chromosome 9
Location:3616373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801033 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATGCCCGCACGCATCACTTCTTGTCGCTGTTCTGTGCCGAGCCTCTA
Internal bar code:TTCGATGTATGCACTTGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5016
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCATCAACGGAATGGGC
Suggested primer 2:TCAGCTAGCGGATCTGCATG