Insertion junction: CLIP2.070458_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070458
Chromosome:chromosome 3
Location:642992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145647 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCTTAATTTGATTGCCCTGGCGTGTTCGAATACCTCCAACAAATAAG
Internal bar code:TGCCGTCAGGAGGGCGATACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:454
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATAATGCATGCGACGCAACC
Suggested primer 2:TGCTAACCCGCAGCTAACAA