Insertion junction: CLIP2.070461_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070461
Chromosome:chromosome 7
Location:487219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315600 (1 of 41) PTHR10157 - DOPAMINE BETA HYDROXYLASE RELATED 5'UTR
Cre07.g315650 SMM23 (1 of 1) 2.1.1.164 - Demethylrebeccamycin-D-glucose O-methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTCCGGAGAGGGTGCGTGTCTGTGGATCCGAGCCAAGCCGAGACTGA
Internal bar code:TAATCGGTCCGTGGCATGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1204
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCCGAGCATTTGTGACT
Suggested primer 2:CGAGCAGCAGACACCCTAAA