Insertion junction: CLIP2.070463_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070463
Chromosome:chromosome 10
Location:402156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420550 TSP4,CTPA4,CTPA1 (1 of 1) IPR004447 - C-terminal-processing peptidase S41A; C-terminal peptidase A 3'UTR
Cre10.g420551 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGTTCAACAGGATGGAGCCGGTTCAACTCCTGCTCCCAACAACGGCA
Internal bar code:GTCGTTGCGGCAAGATATAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2840
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGAGCTTGTGAAGTGGT
Suggested primer 2:TTTTCTCAGGGCACTGCACA