Insertion junction: CLIP2.070467_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070467
Chromosome:chromosome 1
Location:6788899
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048550 5'UTR
Cre01.g048600 (1 of 239) IPR016024 - Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGAGAGTGGCTCTCCCCCGTGCAGAGAATCACATGTAAGCACTGATG
Internal bar code:TTTGTCAGTAATCTCAACCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5230
LEAP-Seq percent confirming:93.617
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGAGACACTGTGGAGCT
Suggested primer 2:CTACCGGCGGATGAAGTACC