Insertion junction: CLIP2.070467_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070467
Chromosome:chromosome 1
Location:6788925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048550 5'UTR
Cre01.g048600 (1 of 239) IPR016024 - Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCTCTCTCACAGCCAGCCACAGCCCGCCAAGGCTAATGTAACAAATTG
Internal bar code:CCTACATTCAAGAAAAGCCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:7250
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCGGCGGATGAAGTACC
Suggested primer 2:CGTTGAGACACTGTGGAGCT