Insertion junction: CLIP2.070482_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070482
Chromosome:chromosome 9
Location:2699412
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801023 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACATACGCTGTACGGTTCCCTGGCGCCCTACCGTCCGCTGCTGCGGG
Internal bar code:AGTGTACAGCTTCTGGTTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1666
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATCCCGCGTCTTAGATC
Suggested primer 2:GAACTCCTCACACAGCTGCT