Insertion junction: CLIP2.070487_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070487
Chromosome:chromosome 7
Location:5841826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353650 (1 of 29) PF00612 - IQ calmodulin-binding motif (IQ) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCTATCCTGGCCATACACTATTGCAAGCAGCAGAAGCAGGCGACGGGC
Internal bar code:AGTAACTGAGTATTTAGGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2173
LEAP-Seq percent confirming:89.0411
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GTAATCTGACGGCGCGTTTC
Suggested primer 2:AAGTGCATCGTGTACCCTGG