Insertion junction: CLIP2.070490_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070490
Chromosome:chromosome 13
Location:411227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564750 PDE15 3'%252C5'-cyclic-nucleotide phosphodiesterase; (1 of 1) K18729 - protein angel (ANGEL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCGCCCCAGGGGGCAGGGACGGCAGAAGGATGTCGCCCGGATGGACT
Internal bar code:AAACGCTGAAAGTACTATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:686
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCAAAACCCATCACGGA
Suggested primer 2:GGTGGTCCCCTAGAGGCTAA