Insertion junction: CLIP2.070491_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070491
Chromosome:chromosome 17
Location:2968651
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802061 (1 of 11) IPR000626//IPR029071 - Ubiquitin domain // Ubiquitin-related domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCCACGGCGCAGCTCGTTGGAAAAGGCAACTTGGCAGCGTTGCCGGG
Internal bar code:GCCTTGGTAATGGCGCTAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2199
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAGACACGAGAGCAGTC
Suggested primer 2:GCGTGAGATAGTACAGGGCC