Insertion junction: CLIP2.070493_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070493
Chromosome:chromosome 12
Location:1081159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g491500 UBA2,UBA3,UBC1 RUB1/NEDD8 E1 activating enzyme; (1 of 1) K10686 - ubiquitin-activating enzyme E1 C (UBE1C, UBA3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGGCATGCGGAGACACTTGAGGGACTGTGAGGGCCGCCGACCCAAGC
Internal bar code:AGCCCCGAAATTTAGGTACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:986
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAAGGAGGCGTAGGTCG
Suggested primer 2:TACGGCAGTACGGACCTGTA