Insertion junction: CLIP2.070498_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070498
Chromosome:chromosome 4
Location:3692185
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229026 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCCTTGGGGGGGAACACCTAAGCTACCGTAACATACGTCTGCAACC
Internal bar code:GCGCGATAACCATAGCCGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2681
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGTGGACTTACGGTGTG
Suggested primer 2:CGTATGTGTGTCGGGGCTAC