Insertion junction: CLIP2.070505_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070505
Chromosome:chromosome 17
Location:2294896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713550 HTR31,HTR22 Histone H3; (1 of 35) K11253 - histone H3 (H3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACACTCGTGCCAGCCTGTCGCGCACGATGGAAGTGGGGCTCTGTGGGA
Internal bar code:AGTCGCGGTCTAATTAATGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:4223
LEAP-Seq percent confirming:88.9764
LEAP-Seq n confirming:113
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:GACATAGTGGGATCGCAGGG
Suggested primer 2:GACCATCATGCCCAAGGACA