Insertion junction: CLIP2.070516_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070516
Chromosome:chromosome 12
Location:7745706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554450 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTGTAGAACCGCCATGACAGCCCAGAGGTAGCATGGCAGTTAATAGC
Internal bar code:GACCCGCCAAAGAACGAGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5463
LEAP-Seq percent confirming:89.0625
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGGCAGCAGTGTTTTGG
Suggested primer 2:AGGCACTGTAACCGTGGAAG