Insertion junction: CLIP2.070518_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070518
Chromosome:chromosome 9
Location:5621042
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g409951 RuvX homolog; (1 of 1) K07447 - putative holliday junction resolvase (ruvX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAATGCCCTGTATGCGATTCTGGTTGTCGGTTTCAACTCTGTACTCT
Internal bar code:TCGCCAGGTGGGTGAGAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1033
LEAP-Seq percent confirming:23.6842
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCCCTACCCATGCCCCA
Suggested primer 2:AGCAGACTCTGGGGGACTAG