Insertion junction: CLIP2.070520_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070520
Chromosome:chromosome 16
Location:719970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691150 (1 of 11) PF13360 - PQQ-like domain (PQQ_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTTGCATGCTACTTTATTTGCTGGAGGTGGCGGTGAGGCCGCAAGCC
Internal bar code:AACATGTAACTCGCTGGAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1194
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCAGCGTCAGCCTTATAG
Suggested primer 2:GACTGACCTGGTCACACTGG