Insertion junction: CLIP2.070529_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070529
Chromosome:chromosome 12
Location:1695611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486250 ARL6,ARFA1A,FAP333 (1 of 2) PTHR11711:SF181 - ADP-RIBOSYLATION FACTOR A1F; Flagellar Associated Protein 333 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCATATCAGCATGCCTGCATGTGACTGGCTTCCCTTACTTCGCATTGT
Internal bar code:AGGTCCGTGGGCGTCCTCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2757
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:AACTTCCAGGTTCCGACGTC
Suggested primer 2:CAACTGCAAGCAGGTTGACC